Algorithms and a software system for comparative genome analysis [Elektronische Ressource] / vorgelegt von Mohamed Mostafa Mohamed Ibrahim Abouelhoda

Universit at UlmAbteilung Theoretische InformatikArbeitsgruppehe BioinformatikLeiter: Prof. Dr. Uwe Sch oningALGORITHMS AND A SOFTWARE SYSTEMFORCOMPARATIVE GENOME ANALYSISDISSERTATIONzur Erlangung des Doktorgrades Dr. rer. nat.der Fakult at fur Informatik der Universit at Ulmvorgelegt vonMOHAMED MOSTAFA MOHAMED IBRAHIM ABOUELHODAUlm, 2005Amtierender Dekan: Prof. Dr. H. PartschGutachter: Prof. Dr. Enno OhlebuschProf. Dr. Uwe Sch oningProf. Dr. Robert GiegerichTag der Promotion: 13 Juli, 2005University of UlmTheoretical Computer Science DepartmentTheoretical Bioinformatics GroupChairman: Prof. Dr. Uwe Sch oningALGORITHMS AND A SOFTWARE SYSTEMFORCOMPARATIVE GENOME ANALYSISA thesis submitted to theFaculty of Computer Science of University of Ulmin ful llmen t of the requirements forthe degree of Doctor of Science Dr. rer. nat.byMOHAMED MOSTAFA MOHAMED IBRAHIM ABOUELHODAUlm, Germany2005Dean: Prof. Dr. H. PartschReviewers: Prof. Dr. Enno OhlebuschProf. Dr. Uwe Sch oningProf. Dr. Robert GiegerichDay of Conferral of Doctorate: 13 July 2005AcknowledgmentsForemost, I am grateful to my supervisor, Enno Ohlebusch. His con-tinuous support and guidance have greatly in uenced my doctoral studies,research, and this work. I am sure that his teachings will always accompanyme in the trip of scienti c research. I am grateful to Robert Giegerich forintroducing the problem to me, and for refereeing the thesis.